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Anal wart treatment (Treatment of anogenital warts (perianal/anal))

Treatment to clear visible warts around or inside the back passage caused by the human papillomavirus (HPV), using creams, freezing or minor surgery.

✓ Medically reviewed by a GMC-registered consultant · last reviewed September 2026 · next review September 2027 · how we review

In short

  • Anal warts are caused by HPV and treatment clears the visible warts, not the virus underneath.
  • Warts commonly come back after treatment, and small ones often clear on their own.
  • Options include home creams, freezing, or minor surgery, chosen by number, site and preference.
  • NHS sexual health clinics usually treat anal and genital warts free and can offer wider checks.

A plain-English summary. The detail — including risks and recovery — is below.

At a glance

TypeMinor procedure / topical treatment
AnaestheticNot needed for creams; local or general anaesthetic for surgical removal
How long it takesCreams over weeks; clinic treatments are usually short
Hospital stayOutpatient; surgery is usually day case
Time off workOften none for creams; a few days after surgical removal
When you'll see resultsVisible warts often clear over weeks, but they commonly come back
On the NHS?Commonly treated free at NHS sexual health clinics

A general guide. Your surgeon will give you advice for your situation.

Best fit

Clears or reduces visible warts, easing discomfort, itching or self-consciousness

Pause if

Treating a lump as a wart without checking it, when it looks unusual and may need a biopsy.

Main recovery point

Expect sore, red or irritated skin in treated areas. You usually carry on with normal life, following instructions on application or attending freezing...

Good aftercare

Clear instructions on how to use treatments and what soreness to expect.

During treatment (creams or freezing)

Expect sore, red or irritated skin in treated areas. You usually carry on with normal life, following instructions...

First days after surgical removal

The area can be sore, with minor bleeding and discomfort opening your bowels. Simple pain relief, stool softeners...

1–2 weeks after surgery

Soreness usually eases and small wounds heal. Most people return to normal activities.

Weeks to months

Visible warts often clear, but you may need further treatment if new ones appear. Reviews continue until the area...

Medical line illustration of lower rectum and anal canal treatment anatomy for Anal wart treatment.
Illustration only - not a diagnosis, medical advice or a promise of result. Your anatomy and treatment plan may differ. Vuemedics does not publish before-and-after photos.

What is anal wart treatment?

Anal warts are small lumps around, or sometimes inside, the back passage caused by the human papillomavirus (HPV). They are very common and are usually passed on by close skin-to-skin contact, including sex. Most are caused by HPV types that do not cause cancer.

Treatment aims to clear the warts you can see, using creams you apply at home, freezing (cryotherapy) in clinic, or minor surgery to remove or burn them off. The right choice depends on how many warts there are, where they are, and your preference.

It is important to understand that treatment removes the visible warts but does not get rid of the virus itself. Warts commonly come back after any treatment, and many small warts clear on their own over time without treatment at all.

In the UK, anal and genital warts are usually assessed and treated free at sexual health (GUM) clinics, where you can also be checked for other infections if appropriate.

Types & techniques

There isn't one single operation. The right approach depends on you — which is something to discuss with your surgeon.

Topical creams or solutions
Treatments such as podophyllotoxin or imiquimod that you apply at home over several weeks. Suited to external warts; not all are right for inside the anus or in pregnancy.
Cryotherapy (freezing)
Warts are frozen in clinic, often over several sessions. Useful for smaller numbers of warts and during pregnancy.
Surgical removal or cautery
Warts are cut, scraped or burned off, often under local or general anaesthetic. Used for larger, numerous or stubborn warts, or those inside the anal canal.
Watchful waiting
Because many small warts clear by themselves, not treating is sometimes a reasonable option, especially for very small or few warts.

Common options compared

OptionWhere usedSetting
CreamsExternal wartsAt home
FreezingSmall numbersClinic visits
SurgeryLarge/internalDay case

All options can need repeating, and warts can come back whatever is used. Your clinician will help you choose.

Preparing for your surgery

  • Consider being seen at a sexual health (GUM) clinic, where assessment and treatment are usually free and confidential.
  • Ask for an examination to confirm the diagnosis and check whether warts are also inside the anal canal.
  • Tell your clinician if you are, or might be, pregnant, as this changes which treatments are safe.
  • Discuss other infection checks if relevant, based on your history.
  • If creams are planned, learn exactly how and where to apply them to avoid sore skin.
  • If surgery is planned, ask about anaesthetic, transport and time off, and tell them about blood-thinning medicines.
  • Ask about HPV vaccination and how to reduce passing the virus to partners.

What happens

What happens depends on the treatment. With creams, you apply the treatment yourself at home in cycles over several weeks, following careful instructions, with reviews to check progress. Freezing is done in clinic: a cold spray or probe is applied to each wart, which stings briefly, and is usually repeated over several visits.

For surgical treatment, the warts are removed or burned off, often under local anaesthetic for small areas or general anaesthetic for larger or internal warts. The clinician may also examine inside the anal canal.

Whichever method is used, treatment often needs to be repeated, and you will usually be reviewed until the visible warts have cleared. Treatment is generally continued for up to about 16 weeks per episode before reassessing.

Is this operation right for me?

A good consultation should explore whether it's the right choice for you now — including reasons to wait or consider something else.

May not be suitable if…

  • Treating a lump as a wart without checking it, when it looks unusual and may need a biopsy.
  • Strong topical wart creams inside the anal canal or in pregnancy, where they may be unsafe.
  • Aggressive surgery for very minor warts that might clear on their own.
  • Self-treatment with shop-bought wart products meant for hands and feet, which are not for the anal/genital area.

Delay surgery if…

  • You are, or might be, pregnant, until a safe treatment is chosen.
  • There is active infection or significant soreness in the area.
  • A wart looks unusual and needs assessment or biopsy first.
  • You have not had the chance to discuss other infection checks where these are relevant.

Alternatives to discuss

  • Watchful waiting, as many small warts clear on their own.
  • A different treatment method (cream, freezing or surgery) if one does not suit or work.
  • Treatment at an NHS sexual health clinic rather than privately.
  • Considering HPV vaccination to reduce future risk, alongside treating current warts.

Before you decide

Use this as a shared-decision checklist. The aim is not just “can this be done?”, but whether it is right for you, now, with the risks and alternatives clearly understood.

What matters most to me?

Think about symptoms, daily life, work, caring responsibilities, sport, fertility, travel, appearance and anxiety — the right choice depends on your priorities, not just the medical facts.

What are all my options?

Ask about waiting, monitoring, medicines, rehabilitation, a smaller or larger procedure, a different test, NHS referral, or a second opinion where that would help.

What would make me pause?

Active infection, pregnancy, unstable medical problems, smoking, medicines that increase bleeding, poor support at home, or feeling pressured are all reasons to slow down and get tailored advice.

What happens if I do nothing today?

For some problems, waiting is safe; for others, delay can make treatment harder. A good consultation should explain the trade-off in plain English.

Anaesthetic choices

The safest option depends on the operation, your health, the facility and your surgeon/anaesthetist. Ask what is planned and why.

None (creams and freezing)
Topical treatments and cryotherapy are done without anaesthetic, though they can sting.
Local anaesthetic
Used to numb the area for surgical removal or cautery of smaller external warts.
General anaesthetic
May be used for extensive warts or those inside the anal canal.

Benefits

  • Clears or reduces visible warts, easing discomfort, itching or self-consciousness
  • Offers choices to suit the number, size and position of warts
  • Can be done discreetly and free at NHS sexual health clinics
  • Allows examination to check for warts inside the anal canal
  • A chance to discuss HPV, vaccination and reducing spread to partners

Risks & complications

More common
  • Warts coming back after treatment, sometimes more than once
  • Sore, red or irritated skin, especially with creams or freezing
  • Discomfort, stinging or minor bleeding at treated areas
  • Needing several sessions or weeks of treatment
Less common
  • Blistering, ulceration or temporary skin colour change
  • Infection of a treated area
  • Pain or difficulty opening the bowels after surgical treatment near the anus
  • Warts inside the anal canal that need specialist treatment
Rare but serious
  • Scarring or, after extensive surgery, narrowing of the anal opening
  • Heavier bleeding needing attention
  • A wart turning out to need a biopsy because it looks unusual
  • Reaction to a topical treatment that needs stopping

The most important thing to understand is that treatment clears visible warts but does not remove HPV, so recurrence is common whatever method is used. Creams can irritate the skin, and surgery near the anus can be sore and, if extensive, can rarely cause scarring or narrowing. Ask your clinician which option suits your warts, what to expect, and what to do if they come back.

Published figures to discuss

Wart treatment outcomes vary with the method used, the number and site of warts, and the person's immune system. Reliable, comparable success and recurrence percentages are limited, so cautious, qualitative wording is more honest than precise figures. What is clear is that clearance often takes several treatments and that recurrence is common with every method.

FigureReported rangeHow to interpret itSource / confidence
Recurrence after treatmentCommon with all treatments; observational studies report roughly 25–45% recurrence/subsequent wart events in some groupsBecause HPV can persist in the skin, warts often return and may need re-treating. Rates vary by treatment, immune status, wart burden and follow-up.BASHH — National guideline for the management of anogenital warts (2024)journals.sagepub.comPublished figure
Spontaneous clearance without treatmentAbout 30% may regress within 4 months in review data; others persist or increaseThis is why watchful waiting can be reasonable for very small, asymptomatic warts in people with a healthy immune system.BASHH — National guideline for the management of anogenital warts (2024)journals.sagepub.comPublished figure
Pain, ulceration or scarring after destructive treatmentCommon to uncommon depending on treatment extentLarge circumferential treatment risks stenosis and should usually be staged.BASHH — National guideline for the management of anogenital warts (2024)journals.sagepub.comSource-linked context
High-grade anal intraepithelial neoplasia or anal cancer in higher-risk groupsUncommon overall, higher with HIV, immunosuppression and receptive anal sexAtypical, bleeding, ulcerated or treatment-resistant lesions should be biopsied.BASHH — National guideline for the management of anogenital warts (2024)journals.sagepub.comSource-linked context

These are literature figures, not a personalised prediction. Your own risks and likely benefits depend on your circumstances, your health, and how your care is carried out and followed up.

Recovery — what to expect, and when

Recovery depends on the treatment: creams and freezing mainly cause skin soreness, while surgical removal needs a short healing period, as the area around the back passage can be tender.

During treatment (creams or freezing)
Expect sore, red or irritated skin in treated areas. You usually carry on with normal life, following instructions on application or attending freezing sessions.
First days after surgical removal
The area can be sore, with minor bleeding and discomfort opening your bowels. Simple pain relief, stool softeners and warm baths help.
1–2 weeks after surgery
Soreness usually eases and small wounds heal. Most people return to normal activities.
Weeks to months
Visible warts often clear, but you may need further treatment if new ones appear. Reviews continue until the area is clear.
What's normal — and not a worry
  • Sore, red or itchy skin where treatment was applied
  • Minor bleeding or spotting after freezing or surgery
  • Tenderness opening your bowels after surgical treatment
  • Needing repeat treatments over several weeks
  • Seeing new warts appear, which is common and not a sign of failure

Aftercare

  • Follow instructions carefully on how and where to apply any cream, and stop and seek advice if skin becomes very sore.
  • Keep the area clean and dry, and pat rather than rub.
  • After surgery, use simple pain relief, stool softeners and warm baths as advised.
  • Avoid sex while the area is sore or healing, and discuss reducing spread to partners.
  • Attend follow-up so progress can be checked and recurrences treated.
  • Ask about HPV vaccination if you have not had it.
  • Watch for signs of infection or heavier bleeding and seek advice if they occur.
Before-surgery checklist
  • Clear written instructions for any cream
  • Simple pain relief and stool softeners if having surgery
  • Plan for warm baths to soothe the area
  • Follow-up appointment booked to check clearance
  • A plan for what to do if warts come back
  • Information on HPV and protecting partners
  • Knowing who to contact about soreness, bleeding or infection

Scars and how they heal

Creams and freezing rarely scar but can cause temporary redness or skin colour change. Surgical removal can leave small marks, and extensive surgery around the anus can occasionally cause scarring or narrowing, which is why removing very large or numerous warts is done carefully by an experienced clinician.

⚠ Get urgent help if…

  • Heavy or persistent bleeding from the area
  • Increasing pain, swelling, redness, heat or pus (signs of infection)
  • Fever or feeling generally unwell
  • Difficulty or severe pain when opening your bowels after surgery
  • Difficulty passing urine
  • Severe skin reaction, blistering or ulceration from a cream
  • A lump that looks unusual, is hard, or bleeds easily and does not heal

Who to contact: your surgeon or clinic first (keep their number to hand). For urgent advice when you can't reach them, call NHS 111. In an emergency, call 999.

General guidance — it doesn't replace the specific advice your surgeon gives you.

Results & realistic expectations

A good result is clearance of the visible warts and comfort in the area. Many people get there, though it can take weeks and more than one treatment. The result is about the visible warts, not the virus.

Because HPV stays in the skin, warts can come back after any treatment, and new ones can appear. This is common and does not mean treatment has failed; it may simply need repeating.

How long it lasts

Clearance is often not permanent. The virus can persist in the skin, so warts may recur weeks or months later, and treatment may need repeating. Over time many people's immune systems control the virus and warts stop returning, but this varies from person to person.

Combining with other procedures

Anal wart treatment is often combined with a check for other sexually transmitted infections and a conversation about HPV vaccination, which can help protect against some HPV types. If warts are inside the anal canal, an examination and sometimes specialist treatment are combined with treating the external warts.

Follow-up & long-term care

You will usually be reviewed until the visible warts have cleared, with treatment continued for up to about 16 weeks per episode before reassessing. You can return if warts come back. Tell your clinician about a wart that looks unusual, bleeds or does not heal, as it may need a closer look or a biopsy.

  • Returning for treatment if warts recur, which is common
  • Considering HPV vaccination if not already vaccinated
  • Using condoms, which reduce but do not remove the risk of passing HPV on
  • Telling a clinician about any wart that looks unusual or does not heal

Revision and secondary surgery reality

  • Treatment often has to be repeated, and switching methods is common if one does not work.
  • New warts can appear during or after treatment without it being a failure.
  • Stubborn or internal warts may need specialist or surgical treatment.

Ask your surgeon for their own revision rate, what counts as a revision, and what is included in the written aftercare policy.

What good aftercare looks like

  • Clear instructions on how to use treatments and what soreness to expect.
  • A named contact and easy route back if warts recur.
  • Follow-up until the visible warts are clear, with a plan for recurrences.
  • Advice on HPV, vaccination, partner notification and reducing spread, plus a low threshold to biopsy an unusual lump.

What affects the cost

Costs vary a great deal between people and providers, and we don't publish prices. What matters is understanding what drives the cost and making sure your quote is complete. The main things that affect it:

  • Whether treatment is with creams, freezing or surgery
  • The number of treatment sessions or weeks of cream needed
  • The clinician's fee and, for surgery, any anaesthetist's fee
  • Clinic or theatre facility costs for in-person treatments
  • Whether warts inside the anal canal need specialist treatment
  • Any tests for other infections or a biopsy if a wart looks unusual
  • Follow-up appointments to check clearance and treat recurrences
Make sure your written quote includes
  • The cost of the chosen treatment and any likely repeat sessions
  • The clinician's fee and any anaesthetist's fee for surgery
  • Facility or theatre costs where relevant
  • Whether tests for other infections are included or extra
  • Follow-up appointments and treatment of recurrences
  • Any laboratory (biopsy) fee if a wart needs examining
  • What happens, and what it costs, if warts come back or need a different treatment

On the NHS? Anal and genital warts are commonly assessed and treated free at NHS sexual health (GUM) clinics; private care may be used for convenience or speed, but the same warts can usually be treated on the NHS.

You're entitled to your total cost in writing — including aftercare and any revision — before you decide.

Choosing a surgeon safely

  • Check your surgeon is on the GMC Specialist Register for this area.
  • Make sure they practise at a CQC-registered location, and look for membership of bodies like BAAPS or BAPRAS.
  • You're entitled to a two-stage consent process with time to reflect (a cooling-off period). The surgeon who will operate must consent you — not a salesperson.
  • Be wary of pressure: time-limited offers, discounts or deposits taken before you've had time to think are red flags, not bargains.
  • You're entitled to your total cost in writing — including aftercare and any revision — before you decide.

How Vuemedics verifies every consultant →

Questions to ask your medical professional

Take this to your consultation. A good surgeon will welcome every one of these.

  • Are my warts only external, or are some inside the anal canal?
  • Which treatment do you recommend for me, and why?
  • How likely are the warts to come back, and what do I do if they do?
  • Is this treatment safe if I am, or might become, pregnant?
  • Should I be checked for other infections, and should I consider HPV vaccination?
  • How can I reduce the chance of passing HPV to my partner?
  • Are you on the GMC Specialist Register for this area, and which Royal College or professional body are you a member of?
  • Will you be the surgeon who carries out my operation, and who looks after me afterwards?
  • What are the risks for someone like me, and how often do your own patients have a problem or need it repeated or redone?
  • What does a realistic result look like — and what can this operation not achieve?
  • What are my options, including waiting, doing nothing for now, or choosing a different approach?
  • Can I have written information, results and aftercare instructions in a format I can use, including any accessibility or communication support I need?
  • What is the total cost in writing, including any follow-ups, and how much time do I have to decide?

Frequently asked questions

Will treatment get rid of the virus?
No. Treatment clears the warts you can see, but the HPV that causes them can stay in the skin. This is why warts can come back after any treatment.
Can I get anal warts treated on the NHS?
Yes. Anal and genital warts are usually assessed and treated free at NHS sexual health (GUM) clinics, which can also offer wider infection checks and advice.
Do anal warts mean I have cancer?
Most anal warts are caused by HPV types that do not cause cancer. If a lump looks unusual, your clinician may take a biopsy to be sure, but warts themselves are usually not dangerous.
Which treatment is best?
It depends on how many warts there are, where they are, and your preference. Creams suit external warts, freezing suits small numbers, and surgery suits larger, numerous or internal warts. Many people need more than one approach.
Will the warts come back?
They commonly do, because the virus can persist. Recurrence does not mean treatment failed; it may just need repeating. Over time, many people stop getting them.
Can I have sex during treatment?
It is best to avoid sex while the area is sore or healing, and to talk to your clinician about reducing the risk of passing HPV to partners. Condoms help but do not remove the risk.

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How we made this page

Medically reviewed by a GMC-registered consultant. Written in plain English, checked against NHS, NICE, GMC and relevant Royal College / specialist-society guidance, and kept under review. No clinic paid to appear on this page, and we publish no pricing. This is general information to help you prepare — it is not a substitute for advice from your own clinician. How we review our guides →

Source hierarchy: UK regulator and NHS/NICE guidance first, then relevant Royal College or specialist-society guidance, then peer-reviewed evidence for procedure-specific figures where available.

Sources & standards: BASHH — National guideline for the management of anogenital warts (2024) NHS — Genital warts Right Decisions (NHS Scotland) — Warts and other anogenital lumps Milton Keynes University Hospital NHS — Anal warts (patient leaflet) Genital wart recurrence after laser treatment — cohort study (PMC) CDC — Anogenital warts treatment guidelines

Reviews reflect patients' experience of care, not clinical outcomes. For procedure volumes and outcome data see PHIN.

Last medically reviewed 2026-09-21. Spotted something wrong or out of date? Report an error in this guide.

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